BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H01LP1|AL428793
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1771 1760 0.0
>3x_Contig1771
Length = 25932
Score = 1760 bits (887), Expect = 0.0
Identities = 901/905 (99%), Gaps = 1/905 (0%)
Strand = Plus / Plus
Query: 1 atctttacttctgccaattaacggttgtcaacaattcccatcgcctaataataatatcct 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 19227 atctttacttctgccaattaacggttgtaaacaattcccatcgcctaataataatatcct 19286
Query: 61 caaagctcagtcctctgtttcaaggtaaattcaaatgaagttggagataagggggtgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19287 caaagctcagtcctctgtttcaaggtaaattcaaatgaagttggagataagggggtgaag 19346
Query: 121 agtgggtttggggcgtgcgtgtctttatttacaagacgacacacttcttttttttgctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19347 agtgggtttggggcgtgcgtgtctttatttacaagacgacacacttcttttttttgctag 19406
Query: 181 acttagtcttaggtttgctcttaccttgtttaccgaccaaagaagcycttgtagcagcct 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 19407 acttagtcttaggtttgctcttaccttgtttaccgaccaaagaagctcttgtagcagcct 19466
Query: 241 cgaagacttctctgacaccgtaaccggtcttggcagaacattcgatgtagtcaacagcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19467 cgaagacttctctgacaccgtaaccggtcttggcagaacattcgatgtagtcaacagcac 19526
Query: 301 cgatttggtcagcgacttcttgtgcttgagcctgagacacaggttgtaatccttgagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19527 cgatttggtcagcgacttcttgtgcttgagcctgagacacaggttgtaatccttgagctc 19586
Query: 361 ttagttcttcaacaacttgaggatcatttctcaaatctgctttacaaccaaccaagatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19587 ttagttcttcaacaacttgaggatcatttctcaaatctgctttacaaccaaccaagatga 19646
Query: 421 ttggaacaccttgacaaaagtgtaaaacttcagagatccatttttccatcacgttttcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19647 ttggaacaccttgacaaaagtgtaaaacttcagagatccatttttccatcacgttttcta 19706
Query: 481 aggaatctggcaaatcaattgagtaacagattaacacaacgttggaatctgggtacgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19707 aggaatctggcaaatcaattgagtaacagattaacacaacgttggaatctgggtacgaaa 19766
Query: 541 gtggtctcaatctatcataatcttcttggccagcagtatcccacaacgccaattctacgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19767 gtggtctcaatctatcataatcttcttggccagcagtatcccacaacgccaattctacgc 19826
Query: 601 gacgaccgtcaacttcgacatcagcaacgtaattatcgaaaacagtgggcacgtaaacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19827 gacgaccgtcaacttcgacatcagcaacgtaattatcgaaaacagtgggcacgtaaacct 19886
Query: 661 gagggaacttacccttggcgaaaacaatcaataaacaagtcttaccacacgcaccatcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19887 gagggaacttacccttggcgaaaacaatcaataaacaagtcttaccacacgcaccatcac 19946
Query: 721 cgacaataactagctttcttctaatgctggcaacattaccaacagcttgagacattatgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19947 cgacaataactagctttcttctaatgctggcaacattaccaacagcttgagacattatgg 20006
Query: 781 aaagggttaaaacaaatcaaatcactactttttttttattgtattataaaatcaaagctg 840
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 20007 aaagggttaaaacaaatcaaatcactac-ttttttttattgtattataaaatcaaagctg 20065
Query: 841 ttcgaaaactcttgagttattctgttttatgacacttagaaggaatctatatttcttact 900
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20066 ttcgaaaactcttgagtaattctgttttatgacacttagaaggaatctatatttcttact 20125
Query: 901 caata 905
|||||
Sbjct: 20126 caata 20130
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7968
Number of Sequences: 1807
Number of extensions: 7968
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)